Radiative emission of solar features in Ca II K

We investigated the radiative emission of different types of solar features in the spectral range of the Ca II K line. We analyzed full-disk 2k x 2k observations from the PSPT Precision Solar Photometric Telescope. The data were obtained by using three narrow-band interference filters that sample the Ca II K line with different pass bands. Two filters are centered in the line core, the other in the red wing of the line. We measured the intensity and contrast of various solar features, specifically quiet Sun (inter-network), network, enhanced network, plage, and bright plage (facula) regions. Moreover, we compared the results obtained with those derived from the numerical synthesis performed for the three PSPT filters with a widely used radiative code on a set of reference semi-empirical atmosphere models.Comment: In Proceedings of the 25th NSO Workshop: Chromospheric Structure and Dynamic

The Intensity Profile of the Solar Supergranulation

We have measured the average radial (cell center to network boundary) profile of the continuum intensity contrast associated with supergranular flows using data from the Precision Solar Photometric Telescope (PSPT) at the Mauna Loa Solar Observatory (MLSO). After removing the contribution of the network flux elements by the application of masks based on Ca II K intensity and averaging over more than 10^5 supergranular cells, we find a ~ 0.1% decrease in red and blue continuum intensity from the supergranular cell centers outward, corresponding to a ~ 1.0 K decrease in brightness temperature across the cells. The radial intensity profile may be caused either by the thermal signal associated with the supergranular flows or a variation in the packing density of unresolved magnetic flux elements. These are not unambiguously distinguished by the observations, and we raise the possibility that the network magnetic fields play an active role in supergranular scale selection by enhancing the radiative cooling of the deep photosphere at the cell boundaries.Comment: Accepted to Ap

Siberian snow forcing in a dynamically bias-corrected model

We investigate the effect of systematic model biases on teleconnections influencing the Northern Hemisphere wintertime circulation. We perform a two-step nudging and bias-correcting scheme for the dynamic variables of the ECHAM6 atmospheric model to reduce errors in the model climatology relative to ERA-Interim. One result is a significant increase in the strength of the Northern Hemisphere wintertime stratospheric polar vortex, reducing errors in the December–February mean zonal stratospheric winds by up to 75%. The bias corrections are applied to the full atmosphere or the stratosphere only. We compare the response of the bias-corrected and control runs to an increase in Siberian snow cover in October—a surface forcing that, in our experiments, weakens the stratospheric polar vortex from October to December. We find that despite large differences in the vortex strength the magnitude of the stratospheric weakening is similar among the different climatologies, with some differences in the timing and length of the response. Differences are more pronounced in the stratosphere–troposphere coupling, and the subsequent surface response. The snow forcing with the stratosphere-only bias corrections results in a stratospheric response that is comparable to control, yet with an enhanced surface response that extends into early January. The full-atmosphere bias correction’s snow response also has a comparable stratospheric response but a somewhat suppressed surface response. Despite these differences, our results show an overall small sensitivity of the Eurasian snow teleconnection to the background climatology

Theoretical study of electronic relaxation processes in hydrated Gd³⁺ complexes in solutions

The EPR line widths of [Gd(H2O)(8)](3+) measured in water at various magnetic fields by Merbach's group have been reinterpreted. A theoretical model of the transverse electronic relaxation is proposed, All the terms of the static zero-field splitting (ZFS) allowed by the symmetry of the complex are included and shown to have a significant contribution. The influence of a transient distortion ZFS is also studied

Post-translational protein deimination signatures in sea lamprey (Petromyzon marinus) plasma and plasma-extracellular vesicles

Lampreys are a jawless vertebrate species belonging to an ancient vertebrate lineage that diverged from a common ancestor with humans ~500 million years ago. The sea lamprey (Petromyzon marinus) has a filter feeding ammocoete larval stage that metamorphoses into a parasitic adult, feeding both on teleost and elasmobranch fish. Lampreys are a valuable comparative model species for vertebrate immunity and physiology due to their unique phylogenetic position, unusual adaptive immune system, and physiological adaptions such as tolerance to salinity changes and urea. Peptidylarginine deiminases (PADs) are a phylogenetically conserved enzyme family which catalyses post-translational deimination/citrullination in target proteins, enabling proteins to gain new functions (moonlighting). The identification of deiminated protein targets in species across phylogeny may provide novel insights into post-translational regulation of physiological and pathophysiological processes. Extracellular vesicles (EVs) are membrane vesicles released from cells that carry cargos of small molecules and proteins for cellular communication, involved in both normal and pathological processes. The current study identified deimination signatures in proteins of both total plasma and plasma-EVs in sea lamprey and furthermore reports the first characterisation of plasma-EVs in lamprey. EVs were poly-dispersed in the size range of 40–500 nm, similar to what is observed in other taxa, positive for CD63 and Flotillin-1. Plasma-EV morphology was confirmed by transmission electron microscopy. Assessment of deimination/citrullination signatures in lamprey plasma and plasma-EVs, revealed 72 deimination target proteins involved in immunity, metabolism and gene regulation in whole plasma, and 37 target proteins in EVs, whereof 24 were shared targets. Furthermore, the presence of deiminated histone H3, indicative of gene-regulatory mechanisms and also a marker of neutrophil extracellular trap formation (NETosis), was confirmed in lamprey plasma. Functional protein network analysis revealed some differences in KEGG and GO pathways of deiminated proteins in whole plasma compared with plasma-EVs. For example, while common STRING network clusters in plasma and plasma-EVs included Peptide chain elongation, Viral mRNA translation, Glycolysis and gluconeogenesis, STRING network clusters specific for EVs only included: Cellular response to heat stress, Muscle protein and striated muscle thin filament, Nucleosome, Protein processing in endoplasmic reticulum, Nucleosome and histone deacetylase complex. STRING network clusters specific for plasma were: Adipokinetic hormone receptor activity, Fibrinogen alpha/beta chain family, peptidase S1A, Glutathione synthesis and recycling-arginine, Fructose 1,6-bisphosphate metabolic process, Carbon metabolism and lactate dehydrogenase activity, Post-translational protein phosphorylation, Regulation of insulin-like growth factor transport and clotting cascade. Overall, for the EV citrullinome, five STRING network clusters, 10 KEGG pathways, 15 molecular GO pathways and 29 Reactome pathways were identified, compared with nine STRING network clusters, six KEGG pathways, two Molecular GO pathways and one Reactome pathway specific for whole plasma; while further pathways were shared. The reported findings indicate that major pathways relevant for immunity and metabolism are targets of deimination in lamprey plasma and plasma-EVs, with some differences, and may help elucidating roles for the conserved PAD enzyme family in regulation of immune and metabolic function throughout phylogeny

The influence of African air pollution on regional and global tropospheric chemistry

International audienceWe investigate the relative importance of African biomass burning, biogenic volatile organic compounds (VOC), lightning and anthropogenic emissions to the tropospheric ozone budget over Africa and globally using a coupled global chemistry climate model. Our model studies indicate that the photochemical surface ozone concentration may rise by up to 50 ppbv in the burning region during the biomass burning seasons. Biogenic VOCs contribute between 5?20 ppbv to the near surface ozone concentration over the tropical African region. The impact of lightning on surface ozone is negligible, while anthropogenic emissions contribute a maximum of 10 ppbv to the surface ozone over Nigeria, South-Africa and Egypt. The annual average of the surface and column ozone over Africa shows that biomass burning is the single most important emission source affecting the African region, while biogenic emissions have the highest contribution during the rainy seasons. The contributions of African emissions to global tropospheric ozone burden (TOB) are about 9 Tg, 13 Tg, 8 Tg and 4 Tg for African biomass burning, biogenic VOC, lightning and anthropogenic emissions respectively. These correspond to 2.4%, 3.4%, 2.1% and 1% of the global tropospheric ozone budget respectively. Over Africa itself, the contribution of each of these emission types is only 2.4 Tg, 2.2 Tg, 1.4 Tg and 0.8 Tg respectively. Outside the continent, African biogenic VOC emissions yield the highest contribution to the TOB. Our model calculations suggest that about 70% of the tropospheric ozone produced from emissions in Africa is found outside the continent, thus exerting a noticeable influence on a large part of the tropical troposphere. Latin America experiences the highest impact of African emissions, followed by southeast and south-central Asia, Oceania, and the Middle East for all the emission categories; while Canada, the United States, Russia, Mongolia, China and Europe experience the least impact of African emissions

On the reliability of the fractal dimension measure of solar magnetic features and on its variation with solar cycle

Several studies have investigated the fractal and multifractal nature of magnetic features in the solar photosphere and its variation with the solar magnetic activity cycle. Here we extend those studies by examining the fractal geometry of bright magnetic features at higher atmospheric levels, specifically in the solar chromosphere. We analyze structures identified in CaIIK images obtained with the Precision Solar Photometric Telescopes (PSPTs) at Osservatorio Astronomico di Roma (OAR) and Mauna Loa Solar Observatory (MLSO). Fractal dimension estimates depend on the estimator employed, the quality of the images, and the structure identification techniques used. We examine both real and simulated data and employ two different perimeter-area estimators in order to understand the sensitivity of the deduced fractal properties to pixelization and image quality. The fractal dimension of bright 'magnetic' features in CaIIK images ranges between values of 1.2 and 1.7 for small and large structures respectively. This size dependency largely reflects the importance of image pixelization in the measurement of small objects. The fractal dimension of chromospheric features does not show any clear systematic variation with time over the period examined, the descending phase of solar cycle 23. These conclusions, and the analysis of both real and synthetic images on which they are based, are important in the interpretation of previously reported results

Peaks and Troughs in Helioseismology: The Power Spectrum of Solar Oscillations

I present a matched-wave asymptotic analysis of the driving of solar oscillations by a general localised source. The analysis provides a simple mathematical description of the asymmetric peaks in the power spectrum in terms of the relative locations of eigenmodes and troughs in the spectral response. It is suggested that the difference in measured phase function between the modes and the troughs in the spectrum will provide a key diagnostic of the source of the oscillations. I also suggest a form for the asymmetric line profiles to be used in the fitting of solar power spectra. Finally I present a comparison between the numerical and asymptotic descriptions of the oscillations. The numerical results bear out the qualitative features suggested by the asymptotic analysis but suggest that numerical calculations of the locations of the troughs will be necessary for a quantitative comparison with the observations.Comment: 18 pages + 8 separate figures. To appear in Ap

Grapevine virus C and grapevine leaf roll associated virus 2 are serologically related and appear to be the same virus

Protein extracted from grapevines infected with GLRaV-2 virus was subjected to electrophoresis, followed by Western blots. A protein band of about 23 kDa was detected in all infected plants. When GVC antibodies were used on blots obtained from the same infected plants, a similar protein band was detected in all infected plants. To address the possibility of the presence of another virus with the same molecular weight, the gene coding for the coat protein of GLRaV-2 was cloned and expressed in E. coli. The expressed protein reacted positively to both GLRaV- 2 and GVC antibodies. Using Immunosorbent Electron Microscopy (ISEM), polyclonal antibodies prepared against either GVC or GLRaV-2 trapped and decorated GLRaV-2 particles. The cDNA from GVC-infected grapevines and Nicotiana benthamiana were cloned and sequenced. All of the clones that were sequenced had the same sequence as GLRaV-2. Based on the data obtained, we concluded that GVC is the same virus as GLRaV-2. Keywords